D3G Release 25.03a
D3G provides a set of genomic data to support development of oligonucleotide therapeutics.
It consists of data derived from own experiments as well as publicly available databases, where genome sequences, gene models,
and expression data sets are compiled for four species, human, crab-eating macaque, Rhesus macaque, common marmoset, mouse, rat, and rabbit.
Tracks
- RefSeq
- ncbiRefSeqCuratedProteinCoding
- ncbiRefSeqCurated
- ncbiRefSeqPredicted
- Gencode (human and mouse only)
- Top Isoforms by long RNA-seq (human only)
- top_isoforms_per_locus_and_sample
The "top_isoforms_per_locus_and_sample" track is based on
our original expeirments of long RNA-seq data on 22 human tissues.
Data use / embargo
Here we open our original data sets to support development of oligonucleotide therapeutics under CC-BY.
We encourage anyone (for example, in academic institute, commercial company, regulatory agency, or others)
to use the data sets freely for development or assessment of drugs.
Meanwhile, we request users to respect the embargo on the publication of genome-wide analysis based on
this data set, as we are currently preparing manuscripts to provide genome-scale analysis of the non-human
primates with complete description of the experimental and computational details with raw data.
Exceptions to the policy are for analyses on a couple of locus, gene families, and oligonucleotide sequences,
rather than comprehensive large-scale analysis.